Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015861741.1_cds_XP_016515046.1_27430
CDS Infomation

[gene=LOC107831767] [db_xref=GeneID:107831767] [protein=probable aspartyl aminopeptidase] [protein_id=XP_016515046.1] [location=join(42579..42642,42779..42914,43027..43105,43224..43426,43974..44043,45466..45588,45740..45895,46472..46642,48992..49066,49139..49279,49547..49768)] [gbkey=CDS]
Sequence

ATGGCAGTAGCGGCCGATCTGATTGATTTCTTGAACGCTTCTCCTACAGCTTTTCATGCA
GTCGAGGAAGCAAAGAAGAGGCTTAAAAGTGCAGGTTATGTACAAATATTTGAGAGAGAG
GACTGGGATTTGAAAGCTGGGAACAAGTATTTCTTCACTAGGAACCATTCTACTATTGTT
GCTTTTGCTCTCGGTAAAAAATACGTTGCTGGAAATGGATTTTACATAATTGGTGCTCAT
ACAGATAGTCCTTGTCTGAAGCTGAAGCCAGTTTCTAAGGTAACTAAAAATGGATTTCTG
GAAGTGGGTGTACAAACGTATGGGGGTGGTCTTTGGCATACTTGGTTTGATCGTGATTTG
ACAGTTGCGGGAAGGATGATTATAAGGAGTAGGAAAGATGGTTCTGAATCCTACTTGCAC
AAGCTTGTGAGAATTGAGGAGCCCATAATGCGAATTCCAACTTTGGCAATTCACTTAGAA
AGGGGTACGAATGATGGATTTAAGGTGAACACACAGACCCATCTTCTACCAGTATTGGCT
ACATCAATTAAGGATGAACTTAATAAACCAGTTTCCGCTGATGATTCTATTGAAAATGGA
CCTCCAAATGATGGAAGTAAGTCCAGTAAAAAGATAAATCCTGGTGGTGAGCAACATCAT
TCCCTTCTTCTGCAGCTTCTTGCTGCTCAGGCTGGATGTGAACCAAGTGACATATGTGAC
TTTGAGTTGCAAGCATGTGATACTCAGCCAAGTGTTATTGCTGGTGCCATGAAGGAATTT
ATTTTTTCTGGAAGACTGGATAATTTATGCAGTTCATTCTGCTCTCTAAAGGCACTGATA
GATGCTACTTCTCAAAATAGTCTCGAGGACGAGGTTGGTGTAAGAATGGTGGCTCTGTTT
GATCATGAAGAGGTTGGGTCTGATTCAGCACAAGGAGCTGGATCCCCGGTCATGTTTGAT
GCTCTCTCACGAATTACAAGTACATTCAGTCCAGATTCGAAGTTAATACCGAAAGCGATC
CAGAGGAGTTTCCTGGTCTCTGCTGATATGGCACATGCCTTGCATCCTAATTATCCGGAC
AAGCACGAAGAGAATCATCAACCCAAATTTCATGGTGGGCTTGTTATAAAGCACAATGCT
AATCAACGTTATGCCACCAATGCAGTCACTTCCTTCATATTTAGAGAAATAGCTGCTAAG
CACAACATTCCTATTCAGGATTTTGTGATTCGCAATGATATGCCATGTGGCTCAACAATT
GGACCAATATTGGCAAGTGGGATAGGTATTCGAACTGTTGATGTAGGAGCACCGCAGTGG
TCAATGCATAGCATAAGAGAAATGTGTGCAGTGGATGATGTGAAGCATTCGTACGAGCAC
TTTAAGGCCTTCTTCCAAGATTTCTCACATCTTGATGGAAAGATTGCTGTGGACGTCTAG

Peptide Sequence

PEP ID

XP_016515046.1
PEP Infomation

PREDICTED: probable aspartyl aminopeptidase [Nicotiana tabacum]
Sequence

MAVAADLIDFLNASPTAFHAVEEAKKRLKSAGYVQIFEREDWDLKAGNKYFFTRNHSTIV
AFALGKKYVAGNGFYIIGAHTDSPCLKLKPVSKVTKNGFLEVGVQTYGGGLWHTWFDRDL
TVAGRMIIRSRKDGSESYLHKLVRIEEPIMRIPTLAIHLERGTNDGFKVNTQTHLLPVLA
TSIKDELNKPVSADDSIENGPPNDGSKSSKKINPGGEQHHSLLLQLLAAQAGCEPSDICD
FELQACDTQPSVIAGAMKEFIFSGRLDNLCSSFCSLKALIDATSQNSLEDEVGVRMVALF
DHEEVGSDSAQGAGSPVMFDALSRITSTFSPDSKLIPKAIQRSFLVSADMAHALHPNYPD
KHEENHQPKFHGGLVIKHNANQRYATNAVTSFIFREIAAKHNIPIQDFVIRNDMPCGSTI
GPILASGIGIRTVDVGAPQWSMHSIREMCAVDDVKHSYEHFKAFFQDFSHLDGKIAVDV

Transcript Sequence

Gene sequence data has not been registered.